The Philippine Genome Center (PGC) thru its Core Facility for Bioinformatics (CFB) releases today to the global community through the GISAID database six (6) genomes of the SARS-CoV-2 sequences from Philippine samples taken in Metro Manila between 26 to 28 March 2020.
Upon completing and passing the Research Institute for Tropical Medicine’s (RITM) proficiency testing for SARS-CoV-2 detection by Real-Time PCR, the Clinical Genomics Laboratory (CGL) of the Philippine Genome Center is now certified to perform independent testing for COVID-19. The certification is released as of April 23, 2020 by the RITM-DOH.
How does COVID-19 Testing work? See the general checklist and step-by-step procedure on how the COVID-19 testing works, using the Philippine-made GenAmplify test kit.
Salin sa Filipinong mga terminolohiya kaugnay ng COVID-19. Halaw sa salin ni Prof. Eag Narvaez, UPD-FPP.
PGC’s preparation and response in addressing the COVID-19 national health emergency Press Release: Philippine Genome Center gears up to verify presence of 2019-nCoV through whole genome sequencing 01/30/2020 The Philippine Genome Center is ready to verify the presence of 2019-nCoV through whole genome sequencing. With the use of Next Generation DNA/RNA Sequencing equipment (NGS) available […]
The Philippine Genome Center of the University of the Philippines was tasked to handle the sequencing of COVID-19 samples in coordination with the health workers from UP Manila National Institutes of Health, to provide our scientists with crucial scientific information to mitigate the spread of the disease.
According to PGC Executive Director Cynthia Palmes-Saloma, the kit was made possible after genetic experts from others countries used Next Generation DNA Sequencing in trying to understand the nature of the COVID-19 virus. Among the facilities of the center is its DNA Sequencing Laboratory which was established in 2013.
On human genetics, Dr. Maria Corazon De Ungria and Jazelyn Salvador briefly described their research on the genetics of Mangyans in Mindoro and of Philippine Negritos, respectively. They are both from the DNA Analysis Laboratory (DAL), Natural Sciences Research Institute, College of Science, UPD. Meanwhile, Prof. Jae Joseph Russell Rodriguez of the Institute of Biological Sciences, College of Arts and Sciences, UP Los Baños, also in collaboration with DAL, discussed his investigation into the human genetic history of the Sulu Archipelago.
The Centers for Disease Control and Prevention (CDC) describes whole-genome sequencing as a “laboratory procedure that determines the order of bases in the genome of an organism in one process.”
According to CDC, scientists conduct data analysis, which is the fourth step of whole-genome sequencing, to compare “bacterial sequences and identify differences.”
With the use of Next Generation DNA/RNA Sequencing equipment (NGS) available at the Philippine Genome Center (PGC) in the University of the Philippines Diliman Campus, the team of the DNA Sequencing Core Facility (DSCF) is ready and willing to assist RITM and the DOH in confirming suspected cases of 2019-Novel Coronavirus (2019-nCoV) in the country.