JOB DESCRIPTION
- Assist in the design and implementation of various data analysis workflows for the Facility’s research initiatives and/or custom bioinformatics services
- Perform test runs and benchmarking of newly published bioinformatics tools for possible adoption by the Facility
- Develop scripts/codes to enable the pipelining and automation of commonly used analysis workflows
- Contribute to the interpretation and discussion of analysis results
- Assist in writing technical reports, funding proposals, and manuscripts for potential publication
- Perform other tasks that may be assigned by the Facility Director or PGC Executive Director
QUALIFICATIONS
Educational Background
- Bachelor’s degree in molecular biology, biology, genetics, biochemistry, biotechnology, or a related field.
- Coursework or minor in bioinformatics, computational biology, or a similar discipline is a plus.
Technical Skills
- Bioinformatics Tools & Pipelines:
- Familiarity with commonly used bioinformatics tools and workflows for sequence analysis (e.g., BLAST, Bowtie, HISAT2, GATK, etc.).
- Experience running pre-configured workflows for genomics, transcriptomics, or proteomics analysis.
- Basic Scripting Knowledge:
- Ability to write, debug, and modify simple scripts (e.g., in Python, R, or Bash) for data preprocessing and workflow automation.
- Data Handling:
- Comfortable working with large biological datasets (e.g., FASTA, FASTQ, BAM, VCF files) and metadata.
- Operating Systems:
- Familiarity with Linux/Unix environments and command-line operations.
- Visualization & Reporting:
- Basic knowledge of tools for creating visualizations (e.g., Excel, R ggplot2, or Python Matplotlib).
Biological Knowledge
- Solid understanding of molecular biology concepts such as DNA/RNA structure, gene expression, and basic genetic principles.
- Ability to interpret results in the context of biological questions or experiments.
Preferred Experience
- Hands-on experience executing bioinformatics workflows, either through coursework, research projects, or internships.
- Exposure to cloud-based bioinformatics platforms (e.g., Galaxy, Terra, or AWS) is a plus.
Soft Skills
- Strong attention to detail and ability to follow established protocols and pipelines.
- Effective communication skills for reporting results to biologists and interdisciplinary teams.
- Ability to work harmoniously with others, contributing to a positive and collaborative team environment.
- Problem-solving attitude with a willingness to learn new tools and adapt to evolving workflows.
- Enthusiasm for working at the intersection of biology and computation.
- Ability to manage multiple tasks while adhering to deadlines.
All positions are a non-permanent status and open to Filipino applicants with permanent residence in the Philippines.
SUBMIT YOUR LETTER OF APPLICATION AND CV TO hr@pgc.up.edu.ph
with Subject: PGC [indicate position] Application
Deadline for applications: March 14, 2025