Cracking the genomes of marine & non-model organisms: novel approaches for correcting, assembling and scaffolding genomic data using de Bruijn graphs and Hi-C contact maps

For a very long time, most bioinformatic tools for handling genome data have been geared toward haploid (or diploid but nearly homozygous) organisms such as humans, bacteria and laboratory strains of model species. As a result, these tools often perform very badly on highly heterozygous diploid or polyploid organisms, which is the case of many non-model and/or marine species.

jong_de_castro

Medical Records in the Genomic Era

Dr. de Castro has a PhD in Biochemistry and Genetics (University of Texas Medical Branch), but also trained in the Neurosciences (California Institute of Technology, The Burnham Institute). His current work and interests lie in Cancer Immunology (3R Biosystems), and an advocacy for equitable access to health technologies (UnEMR). He is a Biomedical Informatics consultant of the International Atomic Energy Agency (IAEA) and a Balik Scientist under a joint research informatics project between UP Manila and UPLB. He has an B.S. MBB degree from UP Diliman.